Pseudomonas syringae pv. syringae SM, PssSM_2724 (cbrD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae SM
GCF_000412165.1|latest
Locus Tag
PssSM_2724
NCBI Locus TagPSSSM_RS12280
Name
cbrD
Replicon chromosome
Genomic location 3095431 - 3096222 (+ strand)

Cross-References

RefSeq WP_003318733.1
GI 489412792
NCBI Locus Tag PSSSM_RS12280
NCBI Old Locus Tag PssSM_2724

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter
Synonyms
Evidence for Translation
Charge (pH 7) -4.68
Kyte-Doolittle Hydrophobicity Value 0.031
Molecular Weight (kDa) 28.9
Isoelectric Point (pI) 5.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001543 (890 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PssSM_2724
Search term: cbrD
Search term: ABC transporter

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 3.7e-14
Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 3.7e-14
Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 3.7e-14
Percent Identity: 28.7

References

No references are associated with this feature.