Pseudomonas syringae pv. syringae SM, PssSM_2417 (mexD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae SM
GCF_000412165.1|latest |
| Locus Tag |
PssSM_2417
|
| NCBI Locus Tag | PSSSM_RS13790 |
| Name |
mexD
|
| Replicon | chromosome |
| Genomic location | 2709258 - 2712398 (- strand) |
Cross-References
| RefSeq | WP_016567975.1 |
| GI | 514420812 |
| NCBI Locus Tag | PSSSM_RS13790 |
| NCBI Old Locus Tag | PssSM_2417 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
RND-type multidrug efflux system, inner membrane transporter MexD
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -9.34 |
| Kyte-Doolittle Hydrophobicity Value | 0.384 |
| Molecular Weight (kDa) | 111.6 |
| Isoelectric Point (pI) | 5.30 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000417 (2093 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PssSM_2417
Search term: mexD
|
Human Homologs
References
No references are associated with this feature.