Pseudomonas syringae pv. syringae SM, PssSM_0909 (rfbB-1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae SM
GCF_000412165.1|latest |
| Locus Tag |
PssSM_0909
|
| NCBI Locus Tag | PSSSM_RS20925 |
| Name |
rfbB-1
|
| Replicon | chromosome |
| Genomic location | 1051057 - 1052157 (- strand) |
Cross-References
| RefSeq | WP_016567241.1 |
| GI | 514420078 |
| EC Number | 4.2.1.46 |
| NCBI Locus Tag | PSSSM_RS20925 |
| NCBI Old Locus Tag | PssSM_0909 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
dTDP-glucose 4,6-dehydratase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -9.23 |
| Kyte-Doolittle Hydrophobicity Value | -0.249 |
| Molecular Weight (kDa) | 40.6 |
| Isoelectric Point (pI) | 5.56 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004752 (533 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PssSM_0909
Search term: rfbB-1
Search term: dTDP-glucose 4,6-dehydratase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
UDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116]
E-value:
1.2e-13
Percent Identity:
26.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
UDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116]
E-value:
1.2e-13
Percent Identity:
26.2
|
References
No references are associated with this feature.