Pseudomonas syringae pv. syringae SM, PssSM_0014 (rsmB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae SM
GCF_000412165.1|latest |
| Locus Tag |
PssSM_0014
|
| NCBI Locus Tag | PSSSM_RS25265 |
| Name |
rsmB
|
| Replicon | chromosome |
| Genomic location | 17058 - 18383 (- strand) |
Cross-References
| RefSeq | WP_016566812.1 |
| GI | 514419649 |
| EC Number | 2.1.1.176 |
| NCBI Locus Tag | PSSSM_RS25265 |
| NCBI Old Locus Tag | PssSM_0014 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
16S rRNA methyltransferase B
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.91 |
| Kyte-Doolittle Hydrophobicity Value | -0.089 |
| Molecular Weight (kDa) | 47.8 |
| Isoelectric Point (pI) | 7.21 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000017 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PssSM_0014
Search term: rsmB
Search term: 16S rRNA methyltransferase B
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
1.4e-26
Percent Identity:
32.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
1.4e-26
Percent Identity:
32.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
1.4e-26
Percent Identity:
32.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
1.4e-26
Percent Identity:
32.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
1.4e-26
Percent Identity:
32.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
1.4e-26
Percent Identity:
32.5
|
References
No references are associated with this feature.