Pseudomonas sp. GM25, PMI24_05831

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. GM25
GCF_000282255.1|latest
Locus Tag
PMI24_05831
Name
Replicon contig_182.182
Genomic location 4439 - 7537 (+ strand)

Cross-References

RefSeq WP_007960393.1
GI 495235622
INSDC EJM22479.1
NCBI Locus Tag PMI24_05831
UniParc UPI000270502E
UniProtKB Acc J2PGJ1
UniProtKB ID J2PGJ1_9PSED
UniRef100 UniRef100_J2PGJ1
UniRef50 UniRef50_P31224
UniRef90 UniRef90_I4XTC7

Product

Feature Type CDS
Coding Frame 1
Product Name
acriflavine resistance protein B
Synonyms
Evidence for Translation
Charge (pH 7) -6.13
Kyte-Doolittle Hydrophobicity Value 0.333
Molecular Weight (kDa) 110.5
Isoelectric Point (pI) 5.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
adeF AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] ARO:3000777 protein homolog model Strict 766.9 43.52 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000417 (2093 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMI24_05831

Human Homologs

References

No references are associated with this feature.