Pseudomonas sp. GM25, PMI24_05575

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. GM25
GCF_000282255.1|latest
Locus Tag
PMI24_05575
Name
Replicon contig_171.171
Genomic location 106268 - 106744 (- strand)

Cross-References

RefSeq WP_007959825.1
GI 495235054
INSDC EJM23069.1
NCBI Locus Tag PMI24_05575
UniParc UPI00027015CB
UniProtKB Acc J2PI74
UniProtKB ID J2PI74_9PSED
UniRef100 UniRef100_J2PI74
UniRef50 UniRef50_Q4K4S1
UniRef90 UniRef90_K9NR39

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor
Synonyms
Evidence for Translation
Charge (pH 7) 1.41
Kyte-Doolittle Hydrophobicity Value -0.208
Molecular Weight (kDa) 18.2
Isoelectric Point (pI) 8.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000463 (1798 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMI24_05575

Human Homologs

References

No references are associated with this feature.