Pseudomonas sp. GM25, PMI24_05034

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. GM25
GCF_000282255.1|latest
Locus Tag
PMI24_05034
Name
Replicon contig_129.129
Genomic location 19448 - 20779 (- strand)

Cross-References

RefSeq WP_007958857.1
GI 495234086
INSDC EJM24005.1
NCBI Locus Tag PMI24_05034
UniParc UPI0002701E19
UniProtKB Acc J3F255
UniProtKB ID J3F255_9PSED
UniRef100 UniRef100_J3F255
UniRef50 UniRef50_G8QBI1
UniRef90 UniRef90_Q3KAR2

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.49
Kyte-Doolittle Hydrophobicity Value 0.062
Molecular Weight (kDa) 48.2
Isoelectric Point (pI) 5.27

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003157 (326 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMI24_05034

Human Homologs

References

No references are associated with this feature.