Pseudomonas sp. GM25, PMI24_03791

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. GM25
GCF_000282255.1|latest
Locus Tag
PMI24_03791
Name
Replicon contig_72.72
Genomic location 68181 - 69131 (- strand)

Cross-References

RefSeq WP_007956591.1
GI 495231820
INSDC EJM26400.1
NCBI Locus Tag PMI24_03791
UniParc UPI0002700515
UniProtKB Acc J3F6D8
UniProtKB ID J3F6D8_9PSED
UniRef100 UniRef100_J3F6D8
UniRef50 UniRef50_Q9I3S3
UniRef90 UniRef90_Q4KGD3

Product

Feature Type CDS
Coding Frame 1
Product Name
agmatinase
Synonyms
Evidence for Translation
Charge (pH 7) -13.26
Kyte-Doolittle Hydrophobicity Value 0.042
Molecular Weight (kDa) 34.2
Isoelectric Point (pI) 4.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3NIO HYDROLASE 06/16/10 Crystal structure of Pseudomonas aeruginosa guanidinobutyrase Pseudomonas aeruginosa 2 X-RAY DIFFRACTION 90.0

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001341 (475 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMI24_03791
Search term: agmatinase

Human Homologs

Ensembl 110, assembly GRCh38.p14
agmatinase [Source:HGNC Symbol;Acc:HGNC:18407]
E-value: 1.4e-113
Percent Identity: 63.0

References

No references are associated with this feature.