Pseudomonas sp. GM25, PMI24_01372

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. GM25
GCF_000282255.1|latest
Locus Tag
PMI24_01372
Name
Replicon contig_29.29
Genomic location 7145 - 8129 (+ strand)
Partial sequence -> 3' end.

Cross-References

RefSeq WP_007952150.1
GI 495227379
INSDC EJM29815.1
NCBI Locus Tag PMI24_01372
UniParc UPI00026FF398
UniProtKB Acc J3FC57
UniProtKB ID J3FC57_9PSED
UniRef100 UniRef100_A0A0C1ZGQ6
UniRef50 UniRef50_Q4KCQ9
UniRef90 UniRef90_Q4KCQ9

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator with HTH domain and aminotransferase domain
Synonyms
Evidence for Translation
Charge (pH 7) 0.08
Kyte-Doolittle Hydrophobicity Value -0.066
Molecular Weight (kDa) 36.1
Isoelectric Point (pI) 7.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001567 (527 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMI24_01372

Human Homologs

References

No references are associated with this feature.