Pseudomonas sp. GM25, PMI24_00396

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. GM25
GCF_000282255.1|latest
Locus Tag
PMI24_00396
Name
Replicon contig_11.11
Genomic location 63967 - 65043 (+ strand)

Cross-References

RefSeq WP_007950910.1
GI 495226139
INSDC EJM31957.1
NCBI Locus Tag PMI24_00396
UniParc UPI00027014CB
UniProtKB Acc J3FEZ5
UniProtKB ID J3FEZ5_9PSED
UniRef100 UniRef100_J3FEZ5
UniRef50 UniRef50_A4VLZ8
UniRef90 UniRef90_Q3K8T8

Product

Feature Type CDS
Coding Frame 1
Product Name
methylthioribose-1-phosphate isomerase
Synonyms
Evidence for Translation
Charge (pH 7) -10.88
Kyte-Doolittle Hydrophobicity Value 0.021
Molecular Weight (kDa) 38.7
Isoelectric Point (pI) 5.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002446 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMI24_00396

Human Homologs

Ensembl 110, assembly GRCh38.p14
methylthioribose-1-phosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:28469]
E-value: 3.5e-63
Percent Identity: 43.7

References

No references are associated with this feature.