Pseudomonas aeruginosa PACS2, A0K_RS26930

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa PACS2
GCF_000168335.1|latest
Locus Tag
A0K_RS26930
Name
Replicon chromosome
Genomic location 5747405 - 5750122 (- strand)

Cross-References

RefSeq ZP_01367954.1
GI 107104036
NCBI Locus Tag A0K_RS26930

Product

Feature Type CDS
Coding Frame 1
Product Name
exoribonuclease R
Synonyms
Evidence for Translation
Charge (pH 7) 19.14
Kyte-Doolittle Hydrophobicity Value -0.475
Molecular Weight (kDa) 100.1
Isoelectric Point (pI) 9.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004552 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: A0K_RS26930
Search term: exoribonuclease R

Human Homologs

Ensembl 110, assembly GRCh38.p14
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
E-value: 6.1e-48
Percent Identity: 32.2
Ensembl 110, assembly GRCh38.p14
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
E-value: 6.1e-48
Percent Identity: 32.2
Ensembl 110, assembly GRCh38.p14
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
E-value: 6.1e-48
Percent Identity: 32.2

References

No references are associated with this feature.