Pseudomonas aeruginosa CF_PA39, AX20_RS0106180
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa CF_PA39 - Assembly GCF_000568235.2
GCF_000568235.2|latest |
| Locus Tag |
AX20_RS0106180
|
| Name |
|
| Replicon | scaffold5 |
| Genomic location | 12253 - 12966 (- strand) |
Cross-References
| RefSeq | WP_024915376.1 |
| GI | 640474898 |
| NCBI Locus Tag | AX20_RS0106180 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
TetR family transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.04 |
| Kyte-Doolittle Hydrophobicity Value | -0.074 |
| Molecular Weight (kDa) | 26.3 |
| Isoelectric Point (pI) | 5.74 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 3KKD | transcription regulator | 11/05/09 | Structure of a putative tetr transcriptional regulator (pa3699) from pseudomonas aeruginosa pa01 | Pseudomonas aeruginosa PAO1 | 2.1 | X-RAY DIFFRACTION | 99.2 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001978 (500 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: AX20_RS0106180
Search term: TetR family transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.