Pseudomonas syringae DSM 10604, PSSR_RS0108205
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae DSM 10604
GCF_000597765.1|latest |
| Locus Tag |
PSSR_RS0108205
|
| Name |
|
| Replicon | Contig12 |
| Genomic location | 59994 - 62099 (+ strand) |
Cross-References
| RefSeq | WP_003340592.1 |
| GI | 489435059 |
| NCBI Locus Tag | PSSR_RS0108205 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
polynucleotide phosphorylase/polyadenylase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -15.14 |
| Kyte-Doolittle Hydrophobicity Value | -0.016 |
| Molecular Weight (kDa) | 75.0 |
| Isoelectric Point (pI) | 5.00 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004385 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSSR_RS0108205
Search term: polynucleotide phosphorylase/polyadenylase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
E-value:
3.9e-111
Percent Identity:
36.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
E-value:
3.9e-111
Percent Identity:
36.2
|
References
No references are associated with this feature.