Pseudomonas putida KT2440, PP_3178 (garK)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida KT2440 (TIGR)
GCF_000007565.2|latest |
| Locus Tag |
PP_3178
|
| Name |
garK
|
| Replicon | chromosome |
| Genomic location | 3602595 - 3603734 (+ strand) |
| Comment | New function/Role: Part of an alternative route for glycerol metabolism that provides a growth advantage by reducing the lag phase of the cells |
Cross-References
| RefSeq | NP_745322.1 |
| GI | 26989897 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
glycerate kinase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | |
| Kyte-Doolittle Hydrophobicity Value | 0.103 |
| Molecular Weight (kDa) | 39.0 |
| Isoelectric Point (pI) | 5.01 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group | |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PP_3178
Search term: garK
Search term: glycerate kinase
|
Human Homologs
References
|
The Cellular Response to Lanthanum Is Substrate Specific and Reveals a Novel Route for Glycerol Metabolism in Pseudomonas putida KT2440.
Wehrmann M, Toussaint M, Pfannstiel J, Billard P, Klebensberger J
mBio 2020 Apr 28;11(2)
PubMed ID: 32345644
|