Pseudomonas viridiflava LMCA8, RT94_RS25185
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas viridiflava LMCA8
GCF_000834695.1|latest |
| Locus Tag |
RT94_RS25185
|
| Name |
Synonym: RT94_25170 |
| Replicon | contig_63 |
| Genomic location | 140539 - 140808 (+ strand) |
Cross-References
| RefSeq | WP_043306603.1 |
| GI | 759588002 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
flagellar biosynthesis protein FliQ
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.05 |
| Kyte-Doolittle Hydrophobicity Value | 1.306 |
| Molecular Weight (kDa) | 9.9 |
| Isoelectric Point (pI) | 4.30 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 6S3R | PROTEIN TRANSPORT | 06/25/19 | Structure of the FliPQR complex from the flagellar type 3 secretion system of Pseudomonas savastanoi. | Pseudomonas savastanoi pv. phaseolicola; Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) | 3.5 | ELECTRON MICROSCOPY | 93.3 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001364 (537 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: RT94_RS25185
Search term: flagellar biosynthesis protein FliQ
|
Human Homologs
References
No references are associated with this feature.