Pseudomonas viridiflava LMCA8, RT94_RS00825
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas viridiflava LMCA8
GCF_000834695.1|latest |
| Locus Tag |
RT94_RS00825
|
| Name |
Synonym: RT94_00825 |
| Replicon | contig_4 |
| Genomic location | 6280 - 8442 (- strand) |
Cross-References
| RefSeq | WP_043302865.1 |
| GI | 759583984 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
TonB-dependent receptor
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -19.64 |
| Kyte-Doolittle Hydrophobicity Value | -0.467 |
| Molecular Weight (kDa) | 79.2 |
| Isoelectric Point (pI) | 4.76 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001486 (1037 members) |
| Putative Inparalogs |
1 predicted inparalogs ligand-gated channel (RT94_RS25830) 45.1% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: RT94_RS00825
Search term: TonB-dependent receptor
|
Human Homologs
References
No references are associated with this feature.