Pseudomonas viridiflava LMCA8, RT94_RS09425
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas viridiflava LMCA8
GCF_000834695.1|latest |
| Locus Tag |
RT94_RS09425
|
| Name |
Synonym: RT94_09420 |
| Replicon | contig_15 |
| Genomic location | 321497 - 322153 (- strand) |
Cross-References
| RefSeq | WP_004887051.1 |
| GI | 491025358 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
3-oxoacid CoA-transferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -11.58 |
| Kyte-Doolittle Hydrophobicity Value | 0.236 |
| Molecular Weight (kDa) | 23.2 |
| Isoelectric Point (pI) | 4.31 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003435 (528 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: RT94_RS09425
Search term: 3-oxoacid CoA-transferase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527]
E-value:
8.0e-55
Percent Identity:
49.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527]
E-value:
8.0e-55
Percent Identity:
49.1
|
References
No references are associated with this feature.