Pseudomonas sp. 20_BN, BN1079_RS05880 (tbtM)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. 20_BN
GCF_000756775.1|latest |
| Locus Tag |
BN1079_RS05880
|
| Name |
tbtM
Synonym: BN1079_01207 |
| Replicon | chromosome |
| Genomic location | 1257859 - 1259289 (+ strand) |
| Comment | 90.8% identity to Pseudomonas stutzeri outer membrane protein TbtM (GenBank: AAD15663.1) |
Cross-References
| RefSeq | WP_037022992.1 |
| GI | 739158802 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
outer membrane protein TbtM
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -13.53 |
| Kyte-Doolittle Hydrophobicity Value | -0.167 |
| Molecular Weight (kDa) | 52.2 |
| Isoelectric Point (pI) | 4.58 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000418 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: BN1079_RS05880
Search term: tbtM
Search term: outer membrane protein TbtM
|
Human Homologs
References
|
TbtABM, a multidrug efflux pump associated with tributyltin resistance in Pseudomonas stutzeri.
Jude F, Arpin C, Brachet-Castang C, Capdepuy M, Caumette P, Quentin C
FEMS Microbiol Lett 2004 Mar 12;232(1):7-14
PubMed ID: 15019728
|