Pseudomonas rhizosphaerae DSM 16299, LT40_RS17275
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas rhizosphaerae DSM 16299
GCF_000761155.1|latest |
| Locus Tag |
LT40_RS17275
|
| Name |
Synonym: LT40_17560 |
| Replicon | chromosome |
| Genomic location | 3888907 - 3889989 (- strand) |
Cross-References
| RefSeq | WP_043192330.1 |
| GI | 759471024 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
dTDP-glucose 4,6-dehydratase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -11.72 |
| Kyte-Doolittle Hydrophobicity Value | -0.224 |
| Molecular Weight (kDa) | 40.1 |
| Isoelectric Point (pI) | 5.37 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004752 (533 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: LT40_RS17275
Search term: dTDP-glucose 4,6-dehydratase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value:
2.9e-25
Percent Identity:
26.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value:
2.9e-25
Percent Identity:
26.2
|
References
No references are associated with this feature.