Pseudomonas rhizosphaerae DSM 16299, LT40_RS12000
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas rhizosphaerae DSM 16299
GCF_000761155.1|latest |
| Locus Tag |
LT40_RS12000
|
| Name |
Synonym: LT40_12235 |
| Replicon | chromosome |
| Genomic location | 2705817 - 2706776 (+ strand) |
Cross-References
| RefSeq | WP_043190342.1 |
| GI | 759469028 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
agmatinase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -8.95 |
| Kyte-Doolittle Hydrophobicity Value | -0.027 |
| Molecular Weight (kDa) | 34.7 |
| Isoelectric Point (pI) | 5.17 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001341 (475 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: LT40_RS12000
Search term: agmatinase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
agmatinase [Source:HGNC Symbol;Acc:HGNC:18407]
E-value:
9.8e-110
Percent Identity:
61.7
|
References
No references are associated with this feature.