Pseudomonas mendocina NBRC 14162, PME1_RS11555 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina NBRC 14162
GCF_000813265.1|latest |
| Locus Tag |
PME1_RS11555
|
| Name |
ampC
|
| Replicon | contig_16 |
| Genomic location | 156026 - 157162 (- strand) |
Cross-References
| RefSeq | WP_041978756.1 |
| GI | 754587025 |
| EC Number | 3.5.2.6 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
class C beta-lactamase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.89 |
| Kyte-Doolittle Hydrophobicity Value | -0.161 |
| Molecular Weight (kDa) | 41.5 |
| Isoelectric Point (pI) | 7.79 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AMR gene predictions from CARD database
Identified using the Resistance Gene Identifier (RGI)
| Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
| PRC-1 | PRC-1 is a beta-lactamase that confers resistance to certain cephalosporins and penicillins. [PMID:34975778] | ARO:3007085 | protein homolog model | Strict | 656.0 | 86.81 | 3.2.5 |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001588 (493 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PME1_RS11555
Search term: ampC
Search term: class C beta-lactamase
|
Human Homologs
References
No references are associated with this feature.