Pseudomonas lini DSM 16768, TU81_RS13305

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas lini DSM 16768
GCF_001042905.1|latest
Locus Tag
TU81_RS13305
Name
Synonym: TU81_13310
Replicon contig_21
Genomic location 236350 - 237084 (- strand)

Cross-References

RefSeq WP_038981857.1
GI 742820318

Product

Feature Type CDS
Coding Frame 1
Product Name
amino acid ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.77
Kyte-Doolittle Hydrophobicity Value -0.089
Molecular Weight (kDa) 27.1
Isoelectric Point (pI) 7.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001274 (527 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: TU81_RS13305

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
E-value: 7.4e-17
Percent Identity: 27.5
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
E-value: 7.4e-17
Percent Identity: 27.5
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
E-value: 7.4e-17
Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
E-value: 7.4e-17
Percent Identity: 29.6

References

No references are associated with this feature.