Pseudomonas knackmussii B13, PKB_RS27030
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas knackmussii B13
GCF_000689415.1|latest |
| Locus Tag |
PKB_RS27030
|
| Name |
Synonym: PKB_5490 |
| Replicon | chromosome |
| Genomic location | 5796104 - 5797363 (+ strand) |
Cross-References
| RefSeq | WP_043256174.1 |
| GI | 759536160 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ABC transporter
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.24 |
| Kyte-Doolittle Hydrophobicity Value | -0.155 |
| Molecular Weight (kDa) | 46.5 |
| Isoelectric Point (pI) | 6.13 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001312 (602 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PKB_RS27030
Search term: ABC transporter
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
E-value:
3.5e-14
Percent Identity:
24.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
E-value:
3.5e-14
Percent Identity:
24.3
|
References
No references are associated with this feature.