Pseudomonas knackmussii B13, PKB_RS13880
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas knackmussii B13
GCF_000689415.1|latest |
| Locus Tag |
PKB_RS13880
|
| Name |
Synonym: PKB_2823 |
| Replicon | chromosome |
| Genomic location | 2941616 - 2942743 (+ strand) |
Cross-References
| RefSeq | WP_043252572.1 |
| GI | 759532511 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
glycerophosphodiester phosphodiesterase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.58 |
| Kyte-Doolittle Hydrophobicity Value | -0.302 |
| Molecular Weight (kDa) | 41.4 |
| Isoelectric Point (pI) | 6.28 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000339 (769 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PKB_RS13880
Search term: glycerophosphodiester phosphodiesterase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
glycerophosphodiester phosphodiesterase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28804]
E-value:
7.9e-18
Percent Identity:
42.9
|
|
Ensembl
110, assembly
GRCh38.p14
|
glycerophosphodiester phosphodiesterase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28804]
E-value:
7.9e-18
Percent Identity:
42.9
|
|
Ensembl
110, assembly
GRCh38.p14
|
glycerophosphodiester phosphodiesterase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28804]
E-value:
7.9e-18
Percent Identity:
42.9
|
|
Ensembl
110, assembly
GRCh38.p14
|
glycerophosphodiester phosphodiesterase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28804]
E-value:
7.9e-18
Percent Identity:
42.9
|
References
No references are associated with this feature.