Pseudomonas knackmussii B13, PKB_RS08650

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas knackmussii B13
GCF_000689415.1|latest
Locus Tag
PKB_RS08650
Name
Synonym: PKB_1755
Replicon chromosome
Genomic location 1802479 - 1805367 (- strand)

Cross-References

RefSeq WP_043250831.1
GI 759530756
EC Number 1.17.4.1

Product

Feature Type CDS
Coding Frame 1
Product Name
ribonucleotide-diphosphate reductase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7) -14.92
Kyte-Doolittle Hydrophobicity Value -0.309
Molecular Weight (kDa) 107.3
Isoelectric Point (pI) 5.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5IM3 OXIDOREDUCTASE 03/05/16 Crystal structure of the class I ribonucleotide reductase from Pseudomonas aeruginosa in complex with dATP Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) 2.298 X-RAY DIFFRACTION 92.7

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001115 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PKB_RS08650

Human Homologs

Ensembl 110, assembly GRCh38.p14
ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]
E-value: 7.9e-155
Percent Identity: 40.5

References

No references are associated with this feature.