Pseudomonas kilonensis 1855-344, VP02_RS20510
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas kilonensis 1855-344
GCF_000968575.1|latest |
| Locus Tag |
VP02_RS20510
|
| Name |
Synonym: VP02_20500 |
| Replicon | contig22 |
| Genomic location | 14219 - 15529 (+ strand) |
Cross-References
| RefSeq | WP_046064668.1 |
| GI | 802919472 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
16S rRNA methyltransferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.18 |
| Kyte-Doolittle Hydrophobicity Value | -0.083 |
| Molecular Weight (kDa) | 47.4 |
| Isoelectric Point (pI) | 7.04 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000017 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: VP02_RS20510
Search term: 16S rRNA methyltransferase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
2.9e-27
Percent Identity:
32.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
2.9e-27
Percent Identity:
32.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
2.9e-27
Percent Identity:
32.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
2.9e-27
Percent Identity:
32.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
2.9e-27
Percent Identity:
32.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
2.9e-27
Percent Identity:
32.7
|
References
No references are associated with this feature.