Pseudomonas fluorescens AU12644, AA054_RS04300
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens AU12644
GCF_001020705.1|latest |
| Locus Tag |
AA054_RS04300
|
| Name |
|
| Replicon | Contig_10 |
| Genomic location | 12224 - 12364 (+ strand) |
Cross-References
| RefSeq | WP_047274741.1 |
| GI | 829035986 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.15 |
| Kyte-Doolittle Hydrophobicity Value | -0.078 |
| Molecular Weight (kDa) | 5.1 |
| Isoelectric Point (pI) | 9.37 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003719 (396 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: AA054_RS04300
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.