Pseudomonas fluorescens C3, VC34_RS09405 (rimO)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens C3
GCF_000967955.1|latest |
| Locus Tag |
VC34_RS09405
|
| Name |
rimO
Synonym: VC34_09400 |
| Replicon | contig_8 |
| Genomic location | 232896 - 234233 (+ strand) |
Cross-References
| RefSeq | WP_046046269.1 |
| GI | 802167628 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ribosomal protein S12 methylthiotransferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -14.15 |
| Kyte-Doolittle Hydrophobicity Value | -0.131 |
| Molecular Weight (kDa) | 49.4 |
| Isoelectric Point (pI) | 4.88 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000882 (537 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: VC34_RS09405
Search term: rimO
Search term: ribosomal protein S12 methylthiotransferase
|
Human Homologs
References
No references are associated with this feature.