Pseudomonas fluorescens C3, VC34_RS00110
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens C3
GCF_000967955.1|latest |
| Locus Tag |
VC34_RS00110
|
| Name |
Synonym: VC34_00110 |
| Replicon | contig_1 |
| Genomic location | 23019 - 24215 (- strand) |
Cross-References
| RefSeq | WP_046044718.1 |
| GI | 802159974 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
Bcr/CflA family drug resistance efflux transporter
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 12.18 |
| Kyte-Doolittle Hydrophobicity Value | 0.931 |
| Molecular Weight (kDa) | 41.2 |
| Isoelectric Point (pI) | 9.67 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002096 (531 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: VC34_RS00110
Search term: Bcr/CflA family drug resistance efflux transporter
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
solute carrier family 22 member 2 [Source:HGNC Symbol;Acc:HGNC:10966]
E-value:
1.6e-05
Percent Identity:
35.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
solute carrier family 22 member 2 [Source:HGNC Symbol;Acc:HGNC:10966]
E-value:
1.6e-05
Percent Identity:
35.7
|
References
No references are associated with this feature.