Pseudomonas chlororaphis PCL1606, PCL1606_RS29505
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas chlororaphis PCL1606
GCF_000963835.1|latest |
| Locus Tag |
PCL1606_RS29505
|
| Name |
Synonym: PCL1606_60550 |
| Replicon | chromosome |
| Genomic location | 6599371 - 6599928 (- strand) |
Cross-References
| RefSeq | WP_044460400.1 |
| GI | 764692845 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
tRNA threonylcarbamoyladenosine biosynthesis protein RimN
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.89 |
| Kyte-Doolittle Hydrophobicity Value | -0.125 |
| Molecular Weight (kDa) | 20.7 |
| Isoelectric Point (pI) | 7.58 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000022 (537 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PCL1606_RS29505
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
E-value:
1.0e-10
Percent Identity:
28.3
|
References
No references are associated with this feature.