Pseudomonas chlororaphis PCL1606, PCL1606_RS26010
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas chlororaphis PCL1606
GCF_000963835.1|latest |
| Locus Tag |
PCL1606_RS26010
|
| Name |
Synonym: PCL1606_53310 |
| Replicon | chromosome |
| Genomic location | 5785836 - 5787245 (- strand) |
Cross-References
| RefSeq | WP_045885808.1 |
| GI | 798805018 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
amino acid permease
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 12.56 |
| Kyte-Doolittle Hydrophobicity Value | 0.779 |
| Molecular Weight (kDa) | 51.1 |
| Isoelectric Point (pI) | 9.72 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000219 (3043 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PCL1606_RS26010
Search term: amino acid permease
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
solute carrier family 7 member 4 [Source:HGNC Symbol;Acc:HGNC:11062]
E-value:
2.4e-11
Percent Identity:
25.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
novel protein
E-value:
2.4e-11
Percent Identity:
25.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
solute carrier family 7 member 4 [Source:HGNC Symbol;Acc:HGNC:11062]
E-value:
2.4e-11
Percent Identity:
25.2
|
References
No references are associated with this feature.