Pseudomonas chlororaphis subsp. aurantiaca JD37, JM49_RS27985
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas chlororaphis subsp. aurantiaca JD37
GCF_000761195.1|latest |
| Locus Tag |
JM49_RS27985
|
| Name |
Synonym: JM49_28550 |
| Replicon | chromosome |
| Genomic location | 6255855 - 6256922 (+ strand) |
Cross-References
| RefSeq | WP_038582843.1 |
| GI | 740797560 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
adenine glycosylase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.76 |
| Kyte-Doolittle Hydrophobicity Value | -0.216 |
| Molecular Weight (kDa) | 39.8 |
| Isoelectric Point (pI) | 7.70 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004741 (533 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: JM49_RS27985
Search term: adenine glycosylase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
novel protein
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
E-value:
4.2e-53
Percent Identity:
37.7
|
References
No references are associated with this feature.