Pseudomonas brassicacearum DF41, CD58_RS06390
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas brassicacearum DF41
GCF_000585995.1|latest |
| Locus Tag |
CD58_RS06390
|
| Name |
Synonym: CD58_06655 |
| Replicon | chromosome |
| Genomic location | 1475400 - 1475999 (- strand) |
Cross-References
| RefSeq | WP_025212214.1 |
| GI | 643462569 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
short-chain dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.08 |
| Kyte-Doolittle Hydrophobicity Value | 0.204 |
| Molecular Weight (kDa) | 21.1 |
| Isoelectric Point (pI) | 6.11 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001028 (423 members) |
| Putative Inparalogs |
1 predicted inparalogs short-chain dehydrogenase (CD58_RS05780) 49.8% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: CD58_RS06390
Search term: short-chain dehydrogenase
|
Human Homologs
References
No references are associated with this feature.