Pseudomonas aeruginosa LESB58, PALES_52941
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest |
| Locus Tag |
PALES_52941
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5839293 - 5840225 (- strand) |
Cross-References
| RefSeq | YP_002442872 |
| GI | 218894003 |
| Entrez | 7179077 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ornithine cyclodeaminase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.23 |
| Kyte-Doolittle Hydrophobicity Value | 0.182 |
| Molecular Weight (kDa) | 32.7 |
| Isoelectric Point (pI) | 7.44 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 267 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001807 (773 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PALES_52941
Search term: ornithine cyclodeaminase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
E-value:
6.5e-26
Percent Identity:
31.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
E-value:
6.5e-26
Percent Identity:
31.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
E-value:
6.5e-26
Percent Identity:
31.2
|
References
No references are associated with this feature.