Pseudomonas aeruginosa LESB58, PALES_27401
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest |
| Locus Tag |
PALES_27401
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2941290 - 2942057 (+ strand) |
Cross-References
| RefSeq | YP_002440334 |
| GI | 218891467 |
| Entrez | 7177193 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative short-chain dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.55 |
| Kyte-Doolittle Hydrophobicity Value | 0.180 |
| Molecular Weight (kDa) | 26.5 |
| Isoelectric Point (pI) | 6.56 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 650 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003017 (954 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PALES_27401
Search term: putative short-chain dehydrogenase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
hydroxysteroid 17-beta dehydrogenase 10 [Source:HGNC Symbol;Acc:HGNC:4800]
E-value:
1.3e-72
Percent Identity:
57.5
|
References
No references are associated with this feature.