Pseudomonas aeruginosa LESB58, PALES_17251

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest
Locus Tag
PALES_17251
Name
Replicon chromosome
Genomic location 1853131 - 1855317 (- strand)

Cross-References

RefSeq YP_002439329
GI 218890465
Entrez 7176395

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -11.28
Kyte-Doolittle Hydrophobicity Value -0.246
Molecular Weight (kDa) 80.9
Isoelectric Point (pI) 5.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5FYA HYDROLASE 03/04/16 Cubic crystal of the native PlpD PSEUDOMONAS AERUGINOSA 2.141 X-RAY DIFFRACTION 100.0
5FQU TRANSPORT PROTEIN 12/14/15 Orthorhombic crystal structure of of PlpD (selenomethionine derivative) PSEUDOMONAS AERUGINOSA PAO1 2.74 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 387 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002289 (484 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PALES_17251

Human Homologs

Ensembl 110, assembly GRCh38.p14
patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268]
E-value: 2.0e-25
Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14
patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268]
E-value: 2.0e-25
Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14
patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268]
E-value: 2.0e-25
Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14
patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268]
E-value: 2.0e-25
Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14
patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268]
E-value: 2.0e-25
Percent Identity: 29.6

References

No references are associated with this feature.