Pseudomonas aeruginosa C7447m, M802_5601 (soxD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa C7447m - Assembly GCF_000468935.2
GCF_000468935.2|latest |
| Locus Tag |
M802_5601
|
| Name |
soxD
|
| Replicon | chromosome |
| Genomic location | 6094509 - 6094829 (+ strand) |
Cross-References
| RefSeq | YP_008555698.1 |
| GI | 651854563 |
| Entrez | 19606015 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
subunit delta of sarcosine oxidase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.45 |
| Kyte-Doolittle Hydrophobicity Value | -0.615 |
| Molecular Weight (kDa) | 12.1 |
| Isoelectric Point (pI) | 5.48 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004971 (511 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: M802_5601
Search term: soxD
Search term: subunit delta of sarcosine oxidase
|
Human Homologs
References
No references are associated with this feature.