Pseudomonas aeruginosa PAO1-VE2, N296_294 (speB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1-VE2 - Assembly GCF_000484495.2
GCF_000484495.2|latest
Locus Tag
N296_294
Name
speB
Replicon chromosome
Genomic location 323616 - 324572 (+ strand)

Cross-References

RefSeq YP_008692116.1
GI 651872126
EC Number 3.5.3.11
Entrez 19609523

Product

Feature Type CDS
Coding Frame 1
Product Name
agmatinase
Synonyms
Evidence for Translation
Charge (pH 7) -9.65
Kyte-Doolittle Hydrophobicity Value -0.013
Molecular Weight (kDa) 34.2
Isoelectric Point (pI) 5.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3NIP HYDROLASE 06/16/10 Crystal structure of Pseudomonas aeruginosa guanidinopropionase complexed with 1,6-diaminohexane Pseudomonas aeruginosa 2.5 X-RAY DIFFRACTION 100.0
3NIQ HYDROLASE 06/16/10 Crystal structure of Pseudomonas aeruginosa guanidinopropionase Pseudomonas aeruginosa 2.07 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000285 (312 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: N296_294
Search term: speB
Search term: agmatinase

Human Homologs

Ensembl 110, assembly GRCh38.p14
agmatinase [Source:HGNC Symbol;Acc:HGNC:18407]
E-value: 3.4e-78
Percent Identity: 46.9

References

No references are associated with this feature.