Pseudomonas aeruginosa PAO1-VE13, N297_4290
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa PAO1-VE13 - Assembly GCF_000484545.2
GCF_000484545.2|latest |
| Locus Tag |
N297_4290
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4653504 - 4654301 (- strand) |
Cross-References
| RefSeq | YP_008708342.1 |
| GI | 651876268 |
| Entrez | 19616620 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ABC transporter family protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.86 |
| Kyte-Doolittle Hydrophobicity Value | 0.131 |
| Molecular Weight (kDa) | 28.6 |
| Isoelectric Point (pI) | 7.28 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001543 (890 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: N297_4290
Search term: ABC transporter family protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
E-value:
1.0e-11
Percent Identity:
30.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
E-value:
1.0e-11
Percent Identity:
30.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
E-value:
1.0e-11
Percent Identity:
30.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
E-value:
1.0e-11
Percent Identity:
30.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
E-value:
1.0e-11
Percent Identity:
30.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
E-value:
1.0e-11
Percent Identity:
30.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
E-value:
1.0e-11
Percent Identity:
30.2
|
References
No references are associated with this feature.