Pseudomonas chlororaphis subsp. aureofaciens 30-84, PCHL3084_RS29510
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas chlororaphis subsp. aureofaciens 30-84
GCF_000281915.1|latest |
| Locus Tag |
PCHL3084_RS29510
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 6665915
- 6666319
(- strand)
Partial sequence -> 5' end. |
Cross-References
| RefSeq | WP_037005061.1 |
| GI | 739140193 |
| NCBI Locus Tag | PCHL3084_RS29510 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.76 |
| Kyte-Doolittle Hydrophobicity Value | -0.249 |
| Molecular Weight (kDa) | 14.9 |
| Isoelectric Point (pI) | 4.47 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000079 (812 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PCHL3084_RS29510
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.