Pseudomonas putida NBRC 14164, PP4_24420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida NBRC 14164 - Assembly GCF_000412675.1
GCF_000412675.1|latest
Locus Tag
PP4_24420
Name
Replicon chromosome
Genomic location 2779356 - 2780441 (- strand)

Cross-References

RefSeq YP_008113479.1
GI 512685499
Entrez 16135330
INSDC BAN54295.1
UniParc UPI00034EF624
UniProtKB Acc T2H5T3
UniProtKB ID T2H5T3_PSEPU
UniRef100 UniRef100_T2H5T3
UniRef50 UniRef50_S3N3W9
UniRef90 UniRef90_Q88IB1

Product

Feature Type CDS
Coding Frame 1
Product Name
putative type VI secretion system protein
Synonyms
Evidence for Translation
Charge (pH 7) -20.04
Kyte-Doolittle Hydrophobicity Value -0.348
Molecular Weight (kDa) 40032.7
Isoelectric Point (pI) 4.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 67 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000081 (1178 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PP4_24420

Human Homologs

References

No references are associated with this feature.