Pseudomonas putida NBRC 14164, PP4_07650

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida NBRC 14164 - Assembly GCF_000412675.1
GCF_000412675.1|latest
Locus Tag
PP4_07650
Name
Replicon chromosome
Genomic location 889273 - 889767 (- strand)

Cross-References

RefSeq YP_008111802.1
GI 512683822
Entrez 16134238
INSDC BAN52618.1
UniParc UPI00034F01BF
UniProtKB Acc T2H2J2
UniProtKB ID T2H2J2_PSEPU
UniRef100 UniRef100_T2H2J2
UniRef50 UniRef50_Q4KI18
UniRef90 UniRef90_Q88E57

Product

Feature Type CDS
Coding Frame 1
Product Name
putative RNA polymerase ECF-type sigma factor
Synonyms
Evidence for Translation
Charge (pH 7) 2.83
Kyte-Doolittle Hydrophobicity Value -0.061
Molecular Weight (kDa) 18464.2
Isoelectric Point (pI) 8.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 184 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000463 (1798 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PP4_07650

Human Homologs

References

No references are associated with this feature.