Pseudomonas aeruginosa MRSN18971, CH80_RS27885
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa MRSN18971
GCF_000710625.1|latest |
| Locus Tag |
CH80_RS27885
|
| NCBI Old Locus Tag | CH80_28055 |
| Name |
Synonym: CH80_28055 |
| Replicon | scaffold00011 |
| Genomic location | 4935 - 7349 (- strand) |
Cross-References
| RefSeq | WP_003144451.1 |
| GI | 489236173 |
| NCBI Locus Tag | CH80_RS27885 |
| NCBI Old Locus Tag | CH80_28055 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ligand-gated channel
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.08 |
| Kyte-Doolittle Hydrophobicity Value | -0.274 |
| Molecular Weight (kDa) | 86.5 |
| Isoelectric Point (pI) | 6.27 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003507 (512 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: CH80_RS27885
Search term: ligand-gated channel
|
Human Homologs
References
No references are associated with this feature.