Pseudomonas aeruginosa MRSN18971, CH80_RS25680
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa MRSN18971
GCF_000710625.1|latest |
| Locus Tag |
CH80_RS25680
|
| NCBI Old Locus Tag | CH80_25795 |
| Name |
Synonym: CH80_25795 |
| Replicon | scaffold00008 |
| Genomic location | 390607 - 392130 (- strand) |
Cross-References
| RefSeq | WP_031654115.1 |
| GI | 685917278 |
| NCBI Locus Tag | CH80_RS25680 |
| NCBI Old Locus Tag | CH80_25795 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
RNA helicase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 8.59 |
| Kyte-Doolittle Hydrophobicity Value | -0.487 |
| Molecular Weight (kDa) | 56.1 |
| Isoelectric Point (pI) | 9.39 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001808 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: CH80_RS25680
Search term: RNA helicase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value:
4.0e-57
Percent Identity:
38.3
|
References
No references are associated with this feature.