Pseudomonas aeruginosa MRSN18971, CH80_RS20990
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa MRSN18971
GCF_000710625.1|latest |
| Locus Tag |
CH80_RS20990
|
| NCBI Old Locus Tag | CH80_21100 |
| Name |
Synonym: CH80_21100 |
| Replicon | scaffold00006 |
| Genomic location | 321494 - 322843 (- strand) |
Cross-References
| RefSeq | WP_003115051.1 |
| GI | 489206020 |
| NCBI Locus Tag | CH80_RS20990 |
| NCBI Old Locus Tag | CH80_21100 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.33 |
| Kyte-Doolittle Hydrophobicity Value | -0.256 |
| Molecular Weight (kDa) | 49.0 |
| Isoelectric Point (pI) | 8.12 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4B62 | MEMBRANE PROTEIN | 08/08/12 | The structure of the cell wall anchor of the T6SS from Pseudomonas aeruginosa | PSEUDOMONAS AERUGINOSA PAO1 | 1.45 | X-RAY DIFFRACTION | 99.3 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000077 (829 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: CH80_RS20990
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.