Pseudomonas aeruginosa AZPAE14842, NR60_RS02615

Gene Feature Overview

Strain	Pseudomonas aeruginosa AZPAE14842 GCF_000789625.1|latest
Locus Tag	NR60_RS02615
Name
Replicon	contig_5
Genomic location	183714 - 185576 (- strand)

Cross-References

RefSeq	WP_003092556.1
GI	489183115
INSDC	BAP21665.1
NCBI Locus Tag	NR60_RS02615
UniParc	UPI0001E9E284
UniProtKB Acc	A0A077JW22
UniProtKB ID	A0A077JW22_PSEAI
UniRef100	UniRef100_A0A077JW22
UniRef50	UniRef50_K9NF77
UniRef90	UniRef90_W0YY94

Product

Feature Type	CDS
Coding Frame	1
Product Name	spermidine dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-3.71
Kyte-Doolittle Hydrophobicity Value	-0.328
Molecular Weight (kDa)	69.0
Isoelectric Point (pI)	6.61

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
7D9H	OXIDOREDUCTASE	10/13/20	SpdH Spermidine dehydrogenase N33 truncation structure	Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)	2.31	X-RAY DIFFRACTION	99.5
7D9F	OXIDOREDUCTASE	10/13/20	SpdH Spermidine dehydrogenase SeMet Structure	Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)	1.85	X-RAY DIFFRACTION	99.4
7D9G	OXIDOREDUCTASE	10/13/20	SpdH Spermidine dehydrogenase native structure	Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)	2.4	X-RAY DIFFRACTION	99.4
7D9J	OXIDOREDUCTASE	10/13/20	SpdH Spermidine dehydrogenase Y443A mutant	Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)	2.19	X-RAY DIFFRACTION	99.2
7D9I	OXIDOREDUCTASE	10/13/20	SpdH Spermidine dehydrogenase D282A mutant	Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)	2.1	X-RAY DIFFRACTION	99.2

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001969 (322 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: NR60_RS02615 Search term: spermidine dehydrogenase

Human Homologs

References