Pseudomonas aeruginosa AZPAE14842, NR60_RS14480

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa AZPAE14842
GCF_000789625.1|latest
Locus Tag
NR60_RS14480
Name
Replicon contig_16
Genomic location 45131 - 46627 (+ strand)

Cross-References

RefSeq WP_003083668.1
GI 489174132
INSDC BAP19216.1
NCBI Locus Tag NR60_RS14480
UniParc UPI0001E9E50B
UniProtKB Acc A0A077JGQ6
UniProtKB ID A0A077JGQ6_PSEAI
UniRef100 UniRef100_A0A077JGQ6
UniRef50 UniRef50_Q4K3N7
UniRef90 UniRef90_Q4K3N7

Product

Feature Type CDS
Coding Frame 1
Product Name
EvpB family type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7) -16.24
Kyte-Doolittle Hydrophobicity Value -0.428
Molecular Weight (kDa) 55.8
Isoelectric Point (pI) 4.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5N8N STRUCTURAL PROTEIN 02/23/17 Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1 Pseudomonas aeruginosa 3.28 ELECTRON MICROSCOPY 99.8

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000083 (1225 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: NR60_RS14480

Human Homologs

References

No references are associated with this feature.