Pseudomonas denitrificans ATCC 13867, H681_21120 (carB)

Gene Feature Overview

Strain	Pseudomonas denitrificans ATCC 13867 GCF_000349845.1|latest
Locus Tag	H681_21120
Name	carB
Replicon	chromosome
Genomic location	4728006 - 4731227 (- strand)

Cross-References

RefSeq	YP_007659631.1
GI	472327385
EC Number	6.3.5.5
Entrez	14998349
INSDC	AGI26091.1
NCBI Locus Tag	H681_21120
UniParc	UPI0002C4F284
UniProtKB Acc	M4X3D7
UniProtKB ID	M4X3D7_PSEDE
UniRef100	UniRef100_M4X3D7
UniRef50	UniRef50_P00968
UniRef90	UniRef90_P38100

Product

Feature Type	CDS
Coding Frame	1
Product Name	carbamoyl phosphate synthase large subunit
Synonyms
Evidence for Translation
Charge (pH 7)	-30.92
Kyte-Doolittle Hydrophobicity Value	-0.131
Molecular Weight (kDa)	117695.8
Isoelectric Point (pI)	4.80

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 624 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004401 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H681_21120 Search term: carB Search term: carbamoyl phosphate synthase large subunit

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000501073 carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323] E-value: 1.7e-230 Percent Identity: 40.9
Ensembl 110, assembly GRCh38.p14	ENSP00000501022 carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323] E-value: 1.7e-230 Percent Identity: 40.9
Ensembl 110, assembly GRCh38.p14	ENSP00000402608 carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323] E-value: 1.7e-230 Percent Identity: 40.9
Ensembl 110, assembly GRCh38.p14	ENSP00000500537 carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323] E-value: 1.7e-230 Percent Identity: 40.9
Ensembl 110, assembly GRCh38.p14	ENSP00000233072 carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323] E-value: 1.7e-230 Percent Identity: 40.9

References