Pseudomonas denitrificans ATCC 13867, H681_15870

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_15870
Name
Replicon chromosome
Genomic location 3585023 - 3585898 (+ strand)

Cross-References

RefSeq YP_007658582.1
GI 472326336
Entrez 14997300
NCBI Locus Tag H681_15870

Product

Feature Type CDS
Coding Frame 1
Product Name
putative short-chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) 2.10
Kyte-Doolittle Hydrophobicity Value 0.007
Molecular Weight (kDa) 30481.5
Isoelectric Point (pI) 7.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6LLN OXIDOREDUCTASE 12/23/19 citronellol catabolism dehydrogenase (AtuB) [Pseudomonas aeruginosa PAO1] Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 1.8 X-RAY DIFFRACTION 90.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002686 (393 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_15870

Human Homologs

Ensembl 110, assembly GRCh38.p14
peroxisomal trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:18281]
E-value: 2.3e-49
Percent Identity: 41.7

References

No references are associated with this feature.