Pseudomonas poae RE_1-1-14, H045_16880 (carB)

Gene Feature Overview

Strain	Pseudomonas poae RE*1-1-14 GCF_000336465.1|latest
Locus Tag	H045_16880
Name	carB
Replicon	chromosome
Genomic location	3862768 - 3865989 (- strand)

Cross-References

RefSeq	YP_007398935.1
GI	447918367
EC Number	6.3.5.5
Entrez	14505167
INSDC	AGE27439.1
NCBI Locus Tag	H045_16880
UniParc	UPI0002A7A6F1
UniProtKB Acc	M4K3A2
UniProtKB ID	M4K3A2_9PSED
UniRef100	UniRef100_M4K3A2
UniRef50	UniRef50_P00968
UniRef90	UniRef90_Q88DU6

Product

Feature Type	CDS
Coding Frame	1
Product Name	carbamoyl phosphate synthase large subunit
Synonyms
Evidence for Translation
Charge (pH 7)	-31.68
Kyte-Doolittle Hydrophobicity Value	-0.098
Molecular Weight (kDa)	117.6
Isoelectric Point (pI)	4.81

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown (This protein may have multiple localization sites) Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 626 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004401 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H045_16880 Search term: carB Search term: carbamoyl phosphate synthase large subunit

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000501022 carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323] E-value: 2.3e-227 Percent Identity: 40.4
Ensembl 110, assembly GRCh38.p14	ENSP00000402608 carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323] E-value: 2.3e-227 Percent Identity: 40.4
Ensembl 110, assembly GRCh38.p14	ENSP00000500537 carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323] E-value: 2.3e-227 Percent Identity: 40.4
Ensembl 110, assembly GRCh38.p14	ENSP00000501073 carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323] E-value: 2.3e-227 Percent Identity: 40.4
Ensembl 110, assembly GRCh38.p14	ENSP00000233072 carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323] E-value: 2.3e-227 Percent Identity: 40.4

References